Here we have some examples to get you started! These examples correspond with the subfolders of the repository examples folder.

The Deid Recipe

In this small tutorial, we will walk through reading and interacting with a deid recipe, replacing header values, and saving new images. This is the recommended tutorial if you want a quick start overview of deid.

Header Manipulation

Cleaning Pixels

See an example of just “inspection” (flagging images based on criteria) or “clean” (replacing values and writing black boxes after inspect) in these examples.

Dicom Extract

These examples generally refer to the action of “getting data out of dicom files and putting them somewhere else.”