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Show a dicom file using hierarchical treeΒΆ
Show a dicom file using a hierarchical tree in a graphical window.
# authors : Guillaume Lemaitre <g.lemaitre58@gmail.com>
# license : MIT
from __future__ import print_function
from pydicom import compat
if compat.in_py2:
import Tix as tkinter_tix
else:
import tkinter.tix as tkinter_tix
print(__doc__)
usage = "Usage: python dicomtree.py dicom_filename"
def RunTree(w, filename):
top = tkinter_tix.Frame(w, relief=tkinter_tix.RAISED, bd=1)
tree = tkinter_tix.Tree(top, options="hlist.columns 2")
tree.pack(expand=1, fill=tkinter_tix.BOTH, padx=10, pady=10,
side=tkinter_tix.LEFT)
# print(tree.hlist.keys()) # use to see the available configure() options
tree.hlist.configure(bg='white', font='Courier 10', indent=30)
tree.hlist.configure(selectbackground='light yellow', gap=150)
box = tkinter_tix.ButtonBox(w, orientation=tkinter_tix.HORIZONTAL)
# box.add('ok', text='Ok', underline=0, command=w.destroy, width=6)
box.add('exit', text='Exit', underline=0, command=w.destroy, width=6)
box.pack(side=tkinter_tix.BOTTOM, fill=tkinter_tix.X)
top.pack(side=tkinter_tix.TOP, fill=tkinter_tix.BOTH, expand=1)
show_file(filename, tree)
def show_file(filename, tree):
tree.hlist.add("root", text=filename)
ds = pydicom.dcmread(sys.argv[1])
ds.decode() # change strings to unicode
recurse_tree(tree, ds, "root", False)
tree.autosetmode()
def recurse_tree(tree, dataset, parent, hide=False):
# order the dicom tags
for data_element in dataset:
node_id = parent + "." + hex(id(data_element))
if isinstance(data_element.value, compat.text_type):
tree.hlist.add(node_id, text=compat.text_type(data_element))
else:
tree.hlist.add(node_id, text=str(data_element))
if hide:
tree.hlist.hide_entry(node_id)
if data_element.VR == "SQ": # a sequence
for i, dataset in enumerate(data_element.value):
item_id = node_id + "." + str(i + 1)
sq_item_description = data_element.name.replace(
" Sequence", "") # XXX not i18n
item_text = "{0:s} {1:d}".format(sq_item_description, i + 1)
tree.hlist.add(item_id, text=item_text)
tree.hlist.hide_entry(item_id)
recurse_tree(tree, dataset, item_id, hide=True)
if __name__ == '__main__':
import sys
import pydicom
if len(sys.argv) != 2:
print("Please supply a dicom file name:\n")
print(usage)
sys.exit(-1)
root = tkinter_tix.Tk()
root.geometry("{0:d}x{1:d}+{2:d}+{3:d}".format(800, 600, 0, 0))
RunTree(root, sys.argv[1])
root.mainloop()
Total running time of the script: ( 0 minutes 0.000 seconds)