.. note:: :class: sphx-glr-download-link-note Click :ref:`here ` to download the full example code .. rst-class:: sphx-glr-example-title .. _sphx_glr_auto_examples_input_output_plot_printing_dataset.py: ========================================== Format the output of the data set printing ========================================== This example illustrates how to print the data set in your own format. .. rst-class:: sphx-glr-script-out Out: .. code-block:: none Image Type = ['DERIVED', 'SECONDARY', 'OTHER'] Instance Creation Date = '20040826' Instance Creation Time = '185434' Instance Creator UID = '1.3.6.1.4.1.5962.3' SOP Class UID = '1.2.840.10008.5.1.4.1.1.4' SOP Instance UID = '1.3.6.1.4.1.5962.1.1.4.1.1.20040826185059.5457' Study Date = '20040826' Series Date = '' Acquisition Date = '' Study Time = '185059' Series Time = '' Acquisition Time = '' Accession Number = '' Modality = 'MR' Manufacturer = 'TOSHIBA_MEC' Institution Name = 'TOSHIBA' Referring Physician's Name = '' Timezone Offset From UTC = '-0400' Station Name = '000000000' Name of Physician(s) Reading Study = '----' Operators' Name = '----' Manufacturer's Model Name = 'MRT50H1' Patient's Name = 'CompressedSamples^MR1' Patient ID = '4MR1' Patient's Birth Date = '' Patient's Sex = 'F' Patient's Size = '' Patient's Weight = "80.0000" Contrast/Bolus Agent = '' Scanning Sequence = 'SE' Sequence Variant = 'NONE' Scan Options = '' MR Acquisition Type = '3D' Slice Thickness = "0.8000" Repetition Time = "4000.0000" Echo Time = "240.0000" Number of Averages = "1.0000" Imaging Frequency = "63.92433900" Imaged Nucleus = 'H' Echo Number(s) = '1' Echo Train Length = '' Device Serial Number = '-0000200' Software Version(s) = 'V3.51*P25' Flip Angle = "90" Patient Position = 'HFS' Study Instance UID = '1.3.6.1.4.1.5962.1.2.4.20040826185059.5457' Series Instance UID = '1.3.6.1.4.1.5962.1.3.4.1.20040826185059.5457' Study ID = '4MR1' Series Number = '1' Acquisition Number = '0' Instance Number = '1' Image Position (Patient) = ['-83.9063', '-91.2000', '6.6406'] Image Orientation (Patient) = ['1.0000', '0.0000', '0.0000', '0.0000', '1.0000',... Frame of Reference UID = '1.3.6.1.4.1.5962.1.4.4.1.20040826185059.5457' Laterality = '' Position Reference Indicator = '' Slice Location = "0.0000" Image Comments = 'Uncompressed' Samples per Pixel = 1 Photometric Interpretation = 'MONOCHROME2' Rows = 64 Columns = 64 Pixel Spacing = ['0.3125', '0.3125'] Bits Allocated = 16 Bits Stored = 16 High Bit = 15 Pixel Representation = 1 Smallest Image Pixel Value = 0 Largest Image Pixel Value = 4000 Window Center = "600" Window Width = "1600" Data Set Trailing Padding = b'\n\x00\xfe\x00\x04\x00\x01\x00\x00\x00\x00\x00\x... | .. code-block:: python # authors : Guillaume Lemaitre # license : MIT from __future__ import print_function import pydicom from pydicom.data import get_testdata_files print(__doc__) def myprint(dataset, indent=0): """Go through all items in the dataset and print them with custom format Modelled after Dataset._pretty_str() """ dont_print = ['Pixel Data', 'File Meta Information Version'] indent_string = " " * indent next_indent_string = " " * (indent + 1) for data_element in dataset: if data_element.VR == "SQ": # a sequence print(indent_string, data_element.name) for sequence_item in data_element.value: myprint(sequence_item, indent + 1) print(next_indent_string + "---------") else: if data_element.name in dont_print: print("""""") else: repr_value = repr(data_element.value) if len(repr_value) > 50: repr_value = repr_value[:50] + "..." print("{0:s} {1:s} = {2:s}".format(indent_string, data_element.name, repr_value)) filename = get_testdata_files('MR_small.dcm')[0] ds = pydicom.dcmread(filename) myprint(ds) **Total running time of the script:** ( 0 minutes 0.011 seconds) .. _sphx_glr_download_auto_examples_input_output_plot_printing_dataset.py: .. only :: html .. container:: sphx-glr-footer :class: sphx-glr-footer-example .. container:: sphx-glr-download :download:`Download Python source code: plot_printing_dataset.py ` .. container:: sphx-glr-download :download:`Download Jupyter notebook: plot_printing_dataset.ipynb ` .. only:: html .. rst-class:: sphx-glr-signature `Gallery generated by Sphinx-Gallery `_